Redesign of MDiG

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Analysis redesign

Currently there is a hack system to accommodate both XML specified analyses and analyses specified on the command line. There are also several distinct types, which are not really differentiated properly.

The new structure would be an Analysis parent class, with several subclasses.

  • Replicate - Runs on each replicate, through time.
  • Envelope - Runs only once replicates are complete, runs on the occupancy envelopes across replicates through time. Specify either mean population, occupancy, or age.
  • ReplicateUnifier - Doesn't use the envelope, but run across replicates to unify the answer with statistical values (i.e. to work out average and s.d. of area occupied).
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